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Using git worktrees to run multiple AI coding agents without file conflicts

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Running two coding agents in the same repository leads to overlapping edits and confusing diffs, which git worktrees solve by giving each task its own folder and branch. A worktree shares history with the main checkout but has separate files, so each agent works on an isolated copy that is merged like a teammate's branch. The guide walks through the basic commands for adding, listing, removing, and pruning worktrees. It also flags common problems, including untracked files like .env not being copied, dependencies needing reinstalling, port and Docker Compose conflicts, and forgotten worktrees piling up. The author recommends treating each agent's branch as a pull request to review before merging, and mentions their own desktop app that automates much of this setup.

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